• Search: Bioinformatics programming using Python

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1

Inferring cellular and molecular processes in single-cell data with non-negative matrix factorization using Python, R and GenePattern Notebook implementations of CoGAPS
Johnson, Jeanette AI ; Tsang, Ashley P ; Mitchell, Jacob T ; et al.
Nature Protocols. 18(12)

46 Information and Compu... 31 Biological Sciences (... 3102 Bioinformatics and... Networking and Informati... Data Science (rcdc) Bioengineering (rcdc) …
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4

Using the Python Programming Language for Bioinformatics
Sanner, Michel F
Encyclopedia of Genetics, Genomics, Proteomics and Bioinformatics. 2005, v. 8, p3585-3593.

Computer systems Computational biology Programming languages Pseudocode
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5

Developing a Prediction Model for Author Collaboration in Bioinformatics Research Using Graph Mining Techniques and Big Data Applications.
Ebrahimi, Fezzeh ; Asemi, Asefeh ; Shabani, Ahmad ; et al.
International Journal of Information Science & Management. 2021, Vol. 19 Issue 2, p1-18. 18p.

Big data Recommender systems Python programming langu... Prediction models Science databases Microsoft Excel (Compute...
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6

Incorporating Coding into the Classroom: An Important Component of Modern Bioinformatics Instruction.
Orench-Rivera, Nichole ; Bednarski, April ; Craig, Paul ; et al.
Journal of College Science Teaching. Jan/Feb2025, Vol. 54 Issue 1, p69-77. 9p.

PSYCHOLOGY of students BIOLOGICAL databases GENETIC databases COMPUTER programming WEB-based user interface...
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7

Estimation of Grain Size Distribution of Friction Stir Welded Joint by using Machine Learning Approach
Akshansh Mishra ; Tarushi Pathak
Advances in Distributed Computing and Artificial Intelligence Journal, Vol 10, Iss 1, Pp 99-110 (2020)

friction stir welding machine learning grain size python programming Electronic computers. Co... QA75.5-76.95
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8

Chapter 12 - Data handling using Python
In All About Bioinformatics 2023:267-288

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9

Explore, edit and leverage genomic annotations using Python GTF toolkit.
Lopez, F ; Charbonnier, G ; Kermezli, Y ; et al.
Bioinformatics. Sep2019, Vol. 35 Issue 18, p3487-3488. 2p.

PYTHON programming langu... ANNOTATIONS GENES COORDINATES CHARTS, diagrams, etc.
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10

Pydna: a simulation and documentation tool for DNA assembly strategies using python.
Pereira, Filipa ; Azevedo, Flávio ; Carvalho, Ângela ; et al.
BMC Bioinformatics. 2015, Vol. 16 Issue 1, p1-10. 10p. 5 Diagrams.

SYNTHETIC biology MOLECULAR biology BIOTECHNOLOGY NUCLEOTIDE sequencing COMPUTER simulation BIOINFORMATICS
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11

Machine Learning-Driven Discovery and Database of Cyanobacteria Bioactive Compounds: A Resource for Therapeutics and Bioremediation
Soares, Renato ; Azevedo, Luísa ; Vasconcelos, Vitor ; et al.
Journal of Chemical Information and Modeling. 64(24):9576-9593

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12

Bioinformatics programming using Python
Model, Mitchell L

Computing and Computers
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13

Introducing Programming Skills for Life Science Students.
Mariano, Diego ; Martins, Pedro ; Helene Santos, Lucianna ; et al.
Biochemistry & Molecular Biology Education. May/Jun2019, Vol. 47 Issue 3, p288-295. 8p.

Science students Life skills Computer science student... Students Computer science Life sciences
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14

Visualizing protein big data using Python and Jupyter notebooks.
Biochemistry & Molecular Biology Education. Sep2022, Vol. 50 Issue 5, p431-436. 6p.

Big data Python programming langu... Laptop computers Notebooks Dihedral angles Protein structure
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15

Dynamic Thermal Perception: Analyzing Skin Temperature Patterns Under Cyclical Heat Conditions Using Python
Nidhi Veerendra

Biological physics thermodynamics skin temperature ) thermal comfort theories data analyses use Python bioinformatics pi... …
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16

Demystifying dimensionality reduction techniques in the 'omics' era: A practical approach for biological science students.
Garma, Leonardo D. ; Osório, Nuno S.
Biochemistry & Molecular Biology Education. Mar2024, Vol. 52 Issue 2, p165-178. 14p.

Science students Graduate students Life sciences Python programming langu... Principal components ana... Laptop computers …
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17

Teaching Python programming for bioinformatics with Jupyter notebook in the Post‐COVID‐19 era.
Gupta, Yash Munnalal ; Kirana, Satwika Nindya ; Homchan, Somjit ; et al.
Biochemistry & Molecular Biology Education. Sep2023, Vol. 51 Issue 5, p537-539. 3p.

COVID-19 pandemic Blended learning Learning Distance education DNA sequencing Python programming langu...
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18

Using ChatGPT as a tool for training nonprogrammers to generate genomic sequence analysis code.
Delcher, Haley A. ; Alsatari, Enas S. ; Haastrup, Adeyeye I. ; et al.
Biochemistry & Molecular Biology Education. Jul/Aug2025, Vol. 53 Issue 4, p433-444. 12p.

Computer programming Interdisciplinary educat... ChatGPT Genomics Nucleotide sequencing Python programming langu... …
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19

Prostate Cancer Screening for Specific Races Using Bioinformatics and Artificial Intelligence on Genomic Data
Agustriawan, David
Ultimatics : Jurnal Teknik Informatika; Vol. 16 No. 2 (2024): Ultimatics : Jurnal Teknik Informatika; 117-122 ; ULTIMATICS; Vol 16 No 2 (2024): Ultimatics : Jurnal Teknik Informatika; 117-122 ; 2581-186X ; 2085-4552 ; 10.31937/ti.v16i2

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20

Estimation of Grain Size Distribution of Friction Stir Welded Joint by using Machine Learning Approach
Mishra, Akshansh ; Pathak, Tarushi

Friction Stir Welding Machine Learning Grain Size Python Programming
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