• Suche: "Single-cell transcriptomics"

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1

Systems analysis of clinical malaria reveals proteomic perturbation and innate-adaptive crosstalk linked to disease severity
Lautenbach, Maximilian Julius ; Wyss, Katja ; Yman, Victor ; et al.
Immunity. 58(8):2120-2136

P. falciparum biomarker malaria multiomics proteomics proximity extension assa... …
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2

Mast cells act as pro-angiogenic and pro-tumorigenic players in pituitary gonadotroph tumors
Ilie, Mirela-Diana ; Flores-Martínez, Álvaro ; Chanal, Marie ; et al.
Neuro-Oncology, 2025, ⟨10.1093/neuonc/noaf241⟩

mast cells tumor microen... mast cells tumor microenvironment (... gonadotroph adenomas single-cell transcriptom... spatial transcriptomics …
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3

adverSCarial: a toolkit for exposing classifier vulnerabilities in single-cell transcriptomics
Fievet, Ghislain ; Broséus, Julien ; Meyre, David ; et al.
ISMB/ECCB2025, Jul 2025, Liverpool, United Kingdom

Liverpool, United Kingdo... Single-cell transcriptom... XAI Explainable AI scRNA-seq single-cell RN... ML Machine Learning R Bioconductor …
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4

Efficient Stochastic Simulation of Gene Regulatory Networks Using Hybrid Models of Transcriptional Bursting
Gaillard, Mathilde ; Herbach, Ulysse ; Inférence Statistique et Modélisation pour les Applications Biologiques (SIMBA) ; et al.
Computational Methods in Systems Biology. :109-125

Lyon, France Single-cell transcriptom... Piecewise-deterministic... Stochastic simulation Regulatory networks Gene expression …
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5

BEST4 + cells in the intestinal epithelium
Malonga, Tania ; Vialaneix, Nathalie ; Beaumont, Martin ; et al.
American Journal of Physiology - Cell Physiology. 326(5):C1345-C1352

absorptive cells bestrophin 4 intestinal epithelium organoids single-cell transcriptom... [SDV]Life Sciences [q-bi...
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6

Single-cell transcriptomics of acetaminophen-induced responses in human 2D and 3D liver microtissues
Bwanya, Brian ; Verheijen, Marcha C. T. ; Hauser, Duncan ; et al.
Archives of Toxicology. :1-14

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7

Integrative transcriptomics defines CD36 as a key regulator of immunometabolic signaling in acute myeloid leukemia
Ashaq, Muhammad Sameer ; Zhou, Qian ; Li, Yanxia ; et al.
Genes & Genomics. :1-21

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8

scAN1.0: A reproducible and standardized pipeline for processing 10X single cell RNAseq data
Lepetit, Maxime ; Ilie, Mirela, Diana ; Chanal, Marie ; et al.
In Silico Biology. 15:11-21

Pipeline single cell tra... Pipeline single cell transcriptom... data analysis mapping annotation …
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9

Assessing the vulnerability of single-cell RNA-sequencing classifiers to adversarial attacks with adverSCarial
Fievet, Ghislain ; Broséus, Julien ; Meyre, David ; et al.
European Conference on Computational Biology (ECCB), Sep 2024, Turku (Finlande), Finland

Turku (Finlande), Finlan... adversarial attacks machine learning single-cell transcriptom... eXplainable Artificial I... classifiers …
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10

Emerging tools to advance neuroethology in butterflies and moths
Cicconardi, Francesco ; Farnworth, Max S. ; Grob, Robin ; et al.
Journal of Comparative Physiology A: Neuroethology, Sensory, Neural, and Behavioral Physiology. :1-25

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11

A low-level Cdkn1c/p57kip2 expression in spinal progenitors drives the transition from proliferative to neurogenic modes of division
Mida, Baptiste ; Lehmann, Nathalie ; Goïame, Rosette ; et al.
EMBO Reports. :1-38

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12

Epigenomic landscape of single vascular cells reflects developmental origin and disease risk loci
Weldy, Chad S ; Kundu, Soumya ; Monteiro, João ; et al.
Molecular Systems Biology. 21(11):1522-1546

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13

Endocrine disruptors and male infertility: multi-omics identification of key genes in non-obstructive azoospermia
Hong, Yanggang ; Wang, Yirong ; Li, Jiajun ; et al.
Journal of Assisted Reproduction and Genetics. 42(11):3767-3780

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14

Single-cell views of fate reprogramming in de novo organogenesis
Morinaka, Hatsune ; Chen, Yu ; Sugimoto, Keiko
Journal of Plant Research. 138(6):915-920

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15

A low CDKN1c/p57kip2 expression in spinal progenitors drives the transition from proliferative to neurogenic modes of division
Mida, Baptiste ; Lehman, Nathalie ; Coulpier, Fanny ; et al.

neurogenesis cell cycle... neurogenesis cell cycle neurogenic switch Cdkn1c single cell transcriptom... …
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16

The loss of microRNA-26b promotes aortic calcification through the regulation of cell-specific target genes
Diana Luna Buitrago ; Eva Jover ; Eleonora Mameli ; et al.
Cardiovascular Research. 121:1778-1792

ATHEROSCLEROSIS ANEURYSMS aortic calcification single-cell transcriptom... aortic disease microRNAs …
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17

Integrated Single-Cell and Spatial Transcriptomic Analysis Identifies ISR-Related Genes Driving Immune Regulation in Parkinson’s Disease
Hua Jiang ; Xiaotian Zhang ; Shengyu Feng ; et al.
J Inflamm Res
Journal of Inflammation Research, Vol Volume 18, Iss Issue 1, Pp 9321-9341 (2025)

Parkinson's Disease Spatial Transcriptomics Bioinformatics Single-Cell Transcriptom... Pathology RB1-214 …
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18

Single-cell genomics reveals transcriptional heterogeneity and cellular crosstalk in salivary gland fibrosis
Dan Liang ; Wei Xu ; Yifan Wu ; et al.
J Dent Sci
Journal of Dental Sciences, Vol 20, Iss 3, Pp 1406-1414 (2025)

Endothelial cell Dentistry RK1-715 Original Article Salivary gland fibrosis Single-cell transcriptom...
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19

Single-cell transcriptomics analysis of the healing process of ligament rupture
Haibo Zhao ; Jianbao Gong ; Tengbo Yu ; et al.
Bone Joint Res
Bone & Joint Research, Vol 14, Iss 6, Pp 539-550 (2025)

Diseases of the musculos... macrophages ligament tissues Cartilage RC925-935 repair …
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