• Suche: Bioinformatics programming using Python

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281

Developing a Prediction Model for Author Collaboration in Bioinformatics Research Using Graph Mining Techniques and Big Data Applications
Fezzeh Ebrahimi ; Asefeh Asemi ; Ahmad Shabani ; et al.

0202 electrical engineer... 02 engineering and techn...
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282

JASPAR RESTful API: accessing JASPAR data from any programming language.
Khan, Aziz ; Mathelier, Anthony
Bioinformatics; 5/1/2018, Vol. 34 Issue 9, p1612-1614, 3p

PROGRAMMING languages PYTHON programming langu... TRANSCRIPTION factors AMINO acid sequence BIOINFORMATICS
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283

A Critical Approach to R Programming in the Analysis of lncRNA in Bioinformatics Study
Angshuman Bagchi ; Kuheli Saha ; Arghodeep Sarkar ; et al.
SSRN Electronic Journal.

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284

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285

AFragmenter: schema-free, tuneable protein domain segmentation for AlphaFold protein structures Open Access.
Verwimp, Stefaan ; Lavigne, Rob ; Lood, Cédric ; et al.
Bioinformatics; Nov2025, Vol. 41 Issue 11, p1-5, 5p

PROTEIN domains PROTEIN structure predic... GRAPH connectivity BIOLOGICAL evolution PYTHON programming langu... CLUSTERING algorithms …
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286

Using prototyping to choose a bioinformatics workflow management system.
Jackson M ; Kavoussanakis K ; Wallace EWJ
Publisher: Public Library of Science Country of Publication: United States NLM ID: 101238922 Publication Model: eCollection Cited Medium: Internet ISSN: 1553-7358 (Electronic) Linking ISSN: 1553734X NLM ISO Abbreviation: PLoS Comput Biol Subsets: MEDLINE

Algorithms Data Analysis Genomics Language Programming Languages Reproducibility of Resul... …
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287

gMCSpy: efficient and accurate computation of genetic minimal cut sets in Python.
Rodriguez-Flores, Carlos J ; Barrena, Naroa ; Olaverri-Mendizabal, Danel ; et al.
Bioinformatics. Jun2024, Vol. 40 Issue 6, p1-4. 4p.

GENETIC engineering SYSTEMS biology PYTHON programming langu... METABOLIC models RESEARCH personnel BIOTECHNOLOGY
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288

IntegrAlign: a comprehensive tool for multi-immunofluorescence panel integration through image alignment Open Access.
Hermet, Leo ; Laoubi, Leo ; Scavino, Martial ; et al.
Bioinformatics; Nov2025, Vol. 41 Issue 11, p1-12, 12p

IMMUNOFLUORESCENCE TUMOR microenvironment OPEN source software BIOMARKERS PYTHON programming langu... CELL populations …
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289

CANA v1.0.0: efficient quantification of canalization in automata networks Open Access.
Marcus, Austin M ; Rozum, Jordan ; Sizek, Herbert ; et al.
Bioinformatics; Oct2025, Vol. 41 Issue 10, p1-5, 5p

CELLULAR automata SYMMETRY GENE regulatory networks PYTHON programming langu... BIOLOGICAL networks DYNAMICAL systems …
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290

htsint: a Python library for sequencing pipelines that combines data through gene set generation
Anthony Herrel ; Camille Bonneaud ; Adam J. Richards
BMC Bioinformatics
BMC BIOINFORMATICS

0301 basic medicine XENOPUS-TROPICALIS EXPRESSION DATA 0206 medical engineering BIOLOGY 02 engineering and techn... …
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291

CosinorPy: a python package for cosinor-based rhythmometry
Miha Moškon
BMC Bioinformatics
BMC Bioinformatics, Vol 21, Iss 1, Pp 1-12 (2020)

0301 basic medicine Periodicity Circadian analysis QH301-705.5 Cosinor Computer applications to... …
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292

Pathway analysis through mutual information.
Jeuken, Gustavo S ; Käll, Lukas
Bioinformatics. Jan2024, Vol. 40 Issue 1, p1-10. 10p.

PYTHON programming langu... SOURCE code K-nearest neighbor class... PHENOTYPES
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293

Biotite: new tools for a versatile Python bioinformatics library.
Kunzmann, Patrick ; Müller, Tom David ; Greil, Maximilian ; et al.
BMC Bioinformatics; 6/5/2023, Vol. 24 Issue 1, p1-19, 19p

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294

A Python package for parsing, validating, mapping and formatting sequence variants using HGVS nomenclature
Rudolph Rico ; Jody Westbrook ; Reece K. Hart ; et al.
Bioinformatics

0301 basic medicine 0303 health sciences 03 medical and health sc... Databases, Factual Genome, Human Terminology as Topic …
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295

Large Language Models can Help with Biostatistics and Coding Needed in Radiology Research.
Ghosh A ; Li H ; Trout AT
Publisher: Association Of University Radiologists Country of Publication: United States NLM ID: 9440159 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1878-4046 (Electronic) Linking ISSN: 10766332 NLM ISO Abbreviation: Acad Radiol Subsets: MEDLINE

Humans Large Language Models Radiology Deep Learning Biostatistics methods Biomedical Research …
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296

Microbench: automated metadata management for systems biology benchmarking and reproducibility in Python.
Lubbock, Alexander L R ; Lopez, Carlos F
Bioinformatics. 10/15/2022, Vol. 38 Issue 20, p4823-4825. 3p.

SYSTEMS biology PYTHON programming langu... METADATA INTERNET servers HETEROGENEOUS computing COMPUTATIONAL biology
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297

PEAKQC: periodicity evaluation in single-cell ATAC-seq data for quality assessment Open Access.
Detleffsen, Jan ; Bruns, Brenton ; Bentsen, Mette ; et al.
Briefings in Bioinformatics; Sep2025, Vol. 26 Issue 5, p1-10, 10p

DATA quality QUALITY control CELL populations PYTHON programming langu... CHROMATIN CYTOLOGICAL techniques
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298

AutoWIG: automatic generation of python bindings for C++ libraries
Christophe Pradal ; Pierre Fernique ; Pradal, Christophe ; et al.
PeerJ Computer Science, Vol 4, p e149 (2018)
PeerJ. Computer Science, . (2018)
PeerJ Computer Science

analyse de données FOS: Computer and inform... Automatic bindings gener... Bioinformatics 01 natural sciences Computer Science - Softw... …
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299

Implementing a Resource-Light and Low-Code Large Language Model System for Information Extraction from Mammography Reports: A Pilot Study
Dennstädt, Fabio ; Fauser, Simon ; Cihoric, Nikola ; et al.
Journal of Imaging Informatics in Medicine. :1-15

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300

Plants & Python: A series of lessons in coding, plant biology, computation, and bioinformatics.
VanBuren, Robert ; Rougon-Cardoso, Alejandra ; Amézquita, Erik J. ; et al.
Plant Cell. Jul2022, Vol. 34 Issue 7, p1-1. 1p.

PYTHON programming langu... SCIENTIFIC communication PROGRAMMING languages BOTANY
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