• Suche: Python Scripting for Computational Science

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Development of NCL equivalent serial and parallel python routines for meteorological data analysis.
Gharat, Jatin ; Kumar, Bipin ; Ragha, Leena ; et al.
International Journal of High Performance Computing Applications. May2022, Vol. 36 Issue 3, p337-355. 19p.

DATA analysis PARALLEL programming COMPUTER systems PYTHON programming langu... WEATHER forecasting NATIONAL Center for Atmo...
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123

OpenABC enables flexible, simplified, and efficient GPU accelerated simulations of biomolecular condensates.
Shuming Liu ; Cong Wang ; Andrew P Latham ; et al.
PLoS Computational Biology, Vol 19, Iss 9, p e1011442 (2023)

Biology (General) QH301-705.5
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124

pyKVFinder: an efficient and integrable Python package for biomolecular cavity detection and characterization in data science
João Victor da Silva Guerra ; Helder Veras Ribeiro-Filho ; Gabriel Ernesto Jara ; et al.
BMC Bioinformatics, Vol 22, Iss 1, Pp 1-13 (2021)

Cavity detection Cavity characterization NumPy Python Data structure Data science …
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125

StarFlow: A Script-Centric Data Analysis Environment
Angelino, Elaine Lee ; Yamins, Daniel Louis Kanef ; Seltzer, Margo
Angelino, Elaine, Daniel Yamins, and Margo Seltzer. 2010. StarFlow: a script-centric data analysis environment. Lecture Notes in Computer Science 6378: 236-250. Also published in Proceedings of the Third International Provenance and Annotation Workshop (IPAW 2010), Troy, NY, USA, June 15-16, 2010: Revised Selected Papers. Berlin: Springer.

automatic parallelizatio... automatic updating computational workflows control flow data-flow data analysis …
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126

Nonlinear Structures Optimization for Flexible Flapping Wing MAVs
AIR FORCE RESEARCH LAB WRIGHT-PATTERSON AFB OH AIR VEHICLES DIRECTORATE ; Walker, Jr, Robert L. ; Svanberg, Craig E. ; et al.
DTIC

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127

YesWorkflow: A User-Oriented, Language-Independent Tool for Recovering Workflow Information from Scripts
Timothy McPhillips ; Tianhong Song ; Tyler Kolisnik ; et al.
International Journal of Digital Curation, Vol 10, Iss 1, Pp 298-313 (2015)

Bibliography. Library sc...
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128

The Data Mine model for accessible partnerships in data science.
Betz, Margaret A. ; Sharples, Rebecca L. ; Ward, Mark Daniel
WIREs: Computational Statistics. Jan/Feb2024, Vol. 16 Issue 1, p1-17. 17p.

PURDUE University DATA science DATA mining BUSINESS partnerships COMPUTATIONAL statistics DATA modeling …
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129

Biotite: a unifying open source computational biology framework in Python.
Kunzmann, Patrick ; Hamacher, Kay
BMC Bioinformatics. 10/1/2018, Vol. 19 Issue 1, p1-8. 8p. 4 Diagrams, 2 Graphs.

OPEN source software COMPUTATIONAL biology BIOLOGICAL databases ELECTRONIC data processi... SEQUENCE analysis STRUCTURAL bioinformatic... …
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130

Pytim: A python package for the interfacial analysis of molecular simulations.
Sega, Marcello ; Hantal, György ; Fábián, Balázs ; et al.
Journal of Computational Chemistry. Sep2018, Vol. 39 Issue 25, p2118-2125. 8p.

PYTHON programming langu... MOLECULAR dynamics TRAJECTORY optimization SCRIPTING languages (Com... COMPUTATIONAL chemistry
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131

CRYSTALpytools: A Python infrastructure for the Crystal code.
Camino, Bruno ; Zhou, Huanyu ; Ascrizzi, Eleonora ; et al.
Computer Physics Communications. Nov2023, Vol. 292, pN.PAG-N.PAG. 1p.

MASSACHUSETTS Institute... SOLID state physics PYTHON programming langu... LATTICE dynamics CONDENSED matter SOLID state chemistry …
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132

Vanderbilt University Institute of Imaging Science Center for Computational Imaging XNAT: A multimodal data archive and processing environment.
Harrigan, Robert L. ; Yvernault, Benjamin C. ; Boyd, Brian D. ; et al.
NeuroImage. Jan2016 Part B, Vol. 124, p1097-1101. 5p.

VANDERBILT University MEDICAL databases DATA mining PROTOTYPES SCALABILITY DIGITAL image processing
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133

The pucke.rs toolkit to facilitate sampling the conformational space of biomolecular monomers.
Rihon, Jérôme ; Reynders, Sten ; Bernardes Pinheiro, Vitor ; et al.
Journal of Cheminformatics. 4/17/2025, Vol. 17 Issue 1, p1-20. 20p.

COMPUTATIONAL chemistry POTENTIAL energy surface... MATHEMATICAL optimizatio... LINEAR algebra MOIETIES (Chemistry)
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134

OpenABC Enables Flexible, Simplified, and Efficient GPU Accelerated Simulations of Biomolecular Condensates.
Liu S ; Wang C ; Latham A ; et al.
Country of Publication: United States NLM ID: 101680187 Publication Model: Electronic Cited Medium: Internet ISSN: 2692-8205 (Electronic) Linking ISSN: 26928205 NLM ISO Abbreviation: bioRxiv Subsets: PubMed not MEDLINE

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135

Inform: Efficient Information-Theoretic Analysis of Collective Behaviors
Douglas G. Moore ; Gabriele Valentini ; Sara I. Walker ; et al.
Frontiers in Robotics and AI, Vol 5 (2018)

information transfer information storage information dynamics complex systems collective behavior information theory …
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136

A fully automated tool for constructing multiphysics model and performing simulations of kW-scale solid oxide cell stacks.
Yang, Lin ; Ru, Xiao ; Lin, Zijing
International Journal of Hydrogen Energy. Jun2024, Vol. 69, p698-709. 12p.

SOLID oxide fuel cells OXIDES SIMULATION methods & mod...
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137

Data challenges of biomedical researchers in the age of omics
Rolando Garcia-Milian ; Denise Hersey ; Milica Vukmirovic ; et al.
PeerJ, Vol 6, p e5553 (2018)

Information seeking beha... Data interpretation Statistical Genomics Computational biology Software …
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138

Ganga: A tool for computational-task management and easy access to Grid resources
Mościcki, J.T. ; Brochu, F. ; Ebke, J. ; et al.
Computer Physics Communications. Nov2009, Vol. 180 Issue 11, p2303-2316. 14p.

COMPUTER software NUMERICAL grid generatio... INFORMATION resources SCIENCE projects PARTICLES (Nuclear physi... PROGRAMMING languages …
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139

Papaya Tree Detection with UAV Images Using a GPU-Accelerated Scale-Space Filtering Method
Hao Jiang ; Shuisen Chen ; Dan Li ; et al.
Remote Sensing, Vol 9, Iss 7, p 721 (2017)

compute unified device a... graphics processing unit... PyCUDA scale-space tree detection unmanned aerial vehicle... …
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140

Stochastic field simulation of slope stability problems: Improvement and reduction of computational effort.
Mahmoudi, Elham ; Schmüdderich, Christoph ; Hölter, Raoul ; et al.
Computer Methods in Applied Mechanics & Engineering. Sep2020, Vol. 369, pN.PAG-N.PAG. 1p.

SLOPE stability RANDOM fields MARKOV random fields BENCHMARK problems (Comp... SAFETY factor in enginee...
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